STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_3261Pyridox_oxase_2 domain-containing protein. (281 aa)    
Predicted Functional Partners:
UV8b_297
Pyridoxamine 5'-phosphate oxidase.
     
 0.855
UV8b_1907
Pyridoxine.
     
 0.824
UV8b_2350
Pyridoxal kinase.
     
 0.813
UV8b_5086
Meiotically up-regulated protein.
  
 
 0.742
UV8b_1279
YjeF-N domain protein.
  
 
 0.735
UV8b_8235
Putative voltage-gated K channel beta subunit.
   
 
 0.540
UV8b_7674
Uncharacterized protein.
   
 
 0.540
UV8b_3577
Norsolorinic acid reductase.
   
 
 0.540
UV8b_5013
DNA repair protein rad51.
   
 
 0.540
UV8b_3273
GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
 
      0.534
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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