STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_131Putative arsenite efflux transporter. (367 aa)    
Predicted Functional Partners:
UV8b_4018
Glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
  
  0.830
UV8b_8138
Putative ribosomal assembly complex component Ipi3.
   
 0.691
UV8b_1805
Pre-rRNA-processing protein ipi1.
    
 0.679
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.639
UV8b_438
Calmodulin; Belongs to the calmodulin family.
    
 0.639
UV8b_7392
Uncharacterized protein.
    
 0.635
UV8b_980
Myosin type II heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.579
UV8b_5691
Putative GTP binding protein.
   
  0.567
UV8b_6446
Ulp1 protease family protein.
    
  0.560
UV8b_3692
60S ribosomal protein L2.
    
  0.551
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.