STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_578Heme/steroid binding domain protein; Belongs to the cytochrome b5 family. (259 aa)    
Predicted Functional Partners:
UV8b_913
Receptor-associated protein.
   
  0.606
UV8b_6773
MSPdomain-containing protein.
   
  0.603
UV8b_420
Gtr1/RagA G domain containing protein.
 
      0.595
UV8b_6232
Syntaxin 5.
    
  0.555
UV8b_5494
Putative delta(24(24(1)))-sterol reductase.
    
  0.529
UV8b_2926
C-14 sterol reductase.
    
  0.529
UV8b_2302
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.417
UV8b_6422
GTP-binding protein ypt3.
   
 
  0.412
UV8b_3255
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 
 0.410
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.