STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_1935Uncharacterized protein. (644 aa)    
Predicted Functional Partners:
UV8b_7480
CBS domain containing protein.
   
 0.756
UV8b_91
Nuclear protein SNF4.
   
 0.756
UV8b_90
Uncharacterized protein.
   
 0.756
UV8b_3135
Carbohydrate-binding module family 48 protein.
    
 0.752
UV8b_2399
Putative Snf1 kinase complex beta-subunit Gal83.
    
 0.752
UV8b_2400
Putative Snf1 kinase complex beta-subunit Gal83.
    
 0.752
UV8b_4536
Ribosomal protein subunit S4.
   
 0.738
UV8b_1785
TORC1 growth control complex subunit Kog1.
    
 0.728
UV8b_1251
Serine/threonine-protein kinase.
    
 0.707
UV8b_6483
Conidiophore development protein hymA.
    
 0.696
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.