STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_2350Pyridoxal kinase. (356 aa)    
Predicted Functional Partners:
UV8b_297
Pyridoxamine 5'-phosphate oxidase.
    
 0.873
UV8b_1907
Pyridoxine.
    
 0.868
UV8b_2349
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
 
 
    0.867
UV8b_7985
4-nitrophenylphosphatase.
    
 0.854
UV8b_1908
Pyridoxine biosynthesis protein PDX1; Belongs to the PdxS/SNZ family.
   
 0.828
UV8b_7600
SCF complex subunit Skp1; Belongs to the SKP1 family.
    
 
 0.816
UV8b_3261
Pyridox_oxase_2 domain-containing protein.
     
 0.813
UV8b_5586
Haloacid dehalogenase-like hydrolase.
   
 
 0.788
UV8b_2546
Thiamin biosynthesis protein (Thi-4).
   
 
 0.788
UV8b_560
Pyridoxal phosphate homeostasis protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which may be involved in intracellular homeostatic regulation of pyridoxal 5'- phosphate (PLP), the active form of vitamin B6; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
  
  
 0.776
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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