STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_1437Transporter protein smf2. (935 aa)    
Predicted Functional Partners:
UV8b_5454
Metal homeostatis protein bsd2.
   
 
 0.701
UV8b_5111
Elongation factor 3.
     
 0.593
UV8b_3926
Elongation factor 3.
     
 0.592
UV8b_1480
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
    
  0.582
UV8b_3255
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
  
  
 0.563
UV8b_3053
Vacuolar ATP synthase 16 kDa proteolipid subunit.
    
 0.550
UV8b_7699
HET-s domain protein.
    
  0.532
UV8b_1974
V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
    
  0.532
UV8b_7215
Uncharacterized protein.
   
 
  0.520
UV8b_6663
DUF221 domain-containing protein.
   
 
  0.520
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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