STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_92Vacuolar protein 8. (652 aa)    
Predicted Functional Partners:
UV8b_6299
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
    
 
 0.938
UV8b_3867
Autophagy related lipase.
    
 
 0.938
UV8b_4006
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.700
UV8b_1251
Serine/threonine-protein kinase.
    
 
 0.604
UV8b_307
SNARE domain-containing protein; Belongs to the synaptobrevin family.
    
 
 0.537
UV8b_6832
Autophagy-related protein 11.
    
 
 0.534
UV8b_2910
UPF0052 domain protein.
 
      0.479
MDE1
Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P).
 
      0.472
UV8b_1019
GRAM domain-containing protein.
    
 
 0.443
UV8b_7680
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
  
 0.437
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.