STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_1249Oligomeric golgi complex component. (811 aa)    
Predicted Functional Partners:
UV8b_7575
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
   
 0.998
UV8b_4308
Calcium-transporting ATPase type 2C member 1.
    
 0.998
UV8b_4020
Conserved oligomeric Golgi complex subunit 2.
   
 0.998
UV8b_3327
Sec34-like family protein.
   
 0.998
UV8b_4525
Uncharacterized protein.
   
 
 0.805
UV8b_6232
Syntaxin 5.
     
 0.795
UV8b_3215
Vps52 / Sac2 family protein.
   
 
 0.785
UV8b_4856
Membrin.
     
 0.758
UV8b_5192
Vesicle transport SNARE complex subunit protein.
   
 
 0.744
UV8b_189
Putative GARP complex component (Vps54).
     
 0.730
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.