STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_1613SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family. (260 aa)    
Predicted Functional Partners:
UV8b_5175
Putative cytochrome c oxidase assembly protein.
  
 
 0.932
UV8b_5195
Amine oxidase.
  
 
 0.921
UV8b_4965
Protoheme IX farnesyltransferase.
  
 
 0.789
UV8b_1987
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 0.787
UV8b_5342
Cytochrome c1, heme protein.
    
 0.761
UV8b_7433
Putative mRNA processing protein (Mss51).
    
 
 0.760
UV8b_4226
UDP-glucose 6-dehydrogenase.
 
      0.757
UV8b_7903
Protein sco1.
  
  
 0.710
UV8b_4509
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
     
 0.684
UV8b_3032
Uncharacterized protein.
     
 0.684
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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