STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_765Putative amino-acid N-acetyltransferase subunit Mak10. (735 aa)    
Predicted Functional Partners:
UV8b_2504
L-A virus GAG protein N-acetyltransferase.
   
 0.995
UV8b_3531
ORF 21 protein.
    
 0.972
UV8b_916
LSM domain-containing protein.
    
 0.972
UV8b_966
Amidohydrolase family protein.
    
 0.957
UV8b_5557
Eukaryotic Sm and Sm-like (LSm) protein.
    
 0.893
UV8b_1289
ADP-ribosylation factor family protein.
     
 0.559
UV8b_4062
N-acetyltransferase complex ARD1 subunit.
    
 
 0.523
UV8b_1547
Putative cytoskeleton organization protein.
   
  
 0.504
UV8b_8170
VPS9 domain protein.
   
  
 0.461
UV8b_3681
Putative acetyltransferase.
      
 0.457
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.