STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UV8b_716L-threonine 3-dehydrogenase. (229 aa)    
Predicted Functional Partners:
UV8b_715
L-threonine 3-dehydrogenase.
 
 0.944
UV8b_1828
Putative D-arabinitol dehydrogenase ArbD.
   
 
 0.788
UV8b_2592
Xylose reductase.
  
 0.743
UV8b_1292
D-xylulose kinase.
  
 
 0.725
UV8b_1293
Xylulose kinase-like protein.
  
 
 0.725
UV8b_7721
5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.649
UV8b_4802
Putative aminotransferase.
  
 
 0.649
UV8b_2517
Serine palmitoyltransferase 2.
  
 
 0.649
UV8b_1360
Serine palmitoyltransferase 1.
  
 
 0.649
UV8b_4926
Putative Fe-containing alcohol dehydrogenase.
  
 
 0.638
Your Current Organism:
Ustilaginoidea virens
NCBI taxonomy Id: 1159556
Other names: Claviceps virens, MAFF 240994, MAFF 240995, TNS:F-18423, U. virens, Villosiclava virens, Villosiclava virens (Y. Sakurai ex Nakata) E. Tanaka & C. Tanaka 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.