STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000409365_00647Unannotated protein. (187 aa)    
Predicted Functional Partners:
GCA_000409365_00466
Unannotated protein.
   
 0.982
GCA_000409365_01738
Unannotated protein.
   
 0.982
GCA_000409365_01175
Unannotated protein.
   
    0.960
GCA_000409365_00648
Unannotated protein.
  
  
 0.942
GCA_000409365_01650
Unannotated protein.
   
 
 0.878
GCA_000409365_03315
Unannotated protein.
 
 
  0.767
GCA_000409365_00187
Unannotated protein.
  
 
 0.759
GCA_000409365_00646
Unannotated protein.
 
   
 0.746
GCA_000409365_01340
Unannotated protein.
   
  0.736
GCA_000409365_01463
Unannotated protein.
   
  0.736
Your Current Organism:
Cronobacter dublinensis lausannensis
NCBI taxonomy Id: 1159560
Other names: C. dublinensis subsp. lausannensis LMG 23824, Cronobacter dublinensis subsp. lausannensis E515, Cronobacter dublinensis subsp. lausannensis LMG 23824, Cronobacter dublinensis subsp. lausannensis str. LMG 23824, Cronobacter dublinensis subsp. lausannensis strain LMG 23824
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.