STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000382185_03618Unannotated protein. (583 aa)    
Predicted Functional Partners:
GCA_000382185_03619
Unannotated protein.
 
  
 0.992
GCA_000382185_02467
Unannotated protein.
   
 0.955
GCA_000382185_03620
Unannotated protein.
 
   
 0.785
GCA_000382185_00318
Unannotated protein.
   
 
 0.766
GCA_000382185_00612
Unannotated protein.
     
 0.763
GCA_000382185_00183
Unannotated protein.
   
 
  0.755
GCA_000382185_00728
Unannotated protein.
   
 
  0.754
GCA_000382185_01384
Unannotated protein.
   
 
 0.724
GCA_000382185_01311
Unannotated protein.
    
 0.709
GCA_000382185_03521
Unannotated protein.
   
 
 0.704
Your Current Organism:
Bordetella sp. FB8
NCBI taxonomy Id: 1159870
Other names: B. sp. FB-8, Bordetella sp. FB-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.