STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTA29871.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (103 aa)    
Predicted Functional Partners:
OTA29869.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OTA29870.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OTA29910.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.737
OTA29868.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.686
OTA29866.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.662
OTA29867.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.662
Your Current Organism:
Alloscardovia macacae
NCBI taxonomy Id: 1160091
Other names: A. macacae, Alloscardovia macacae Killer et al. 2013, Alloscardovia sp. M8, CCM 7944, DSM 24762, strain M8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.