STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTA29915.1Acetylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)    
Predicted Functional Partners:
OTA27995.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.676
OTA30249.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.561
B9T39_02140
Alpha-xylosidase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.552
OTA28831.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.532
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 
  0.521
OTA28596.1
alpha-L-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.483
OTA29437.1
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
    
   0.445
OTA30255.1
Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.406
OTA28327.1
Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.406
OTA28198.1
Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.406
Your Current Organism:
Alloscardovia macacae
NCBI taxonomy Id: 1160091
Other names: A. macacae, Alloscardovia macacae Killer et al. 2013, Alloscardovia sp. M8, CCM 7944, DSM 24762, strain M8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.