STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000381925_03780Unannotated protein. (302 aa)    
Predicted Functional Partners:
GCA_000381925_04596
Unannotated protein.
  
  
  0.780
GCA_000381925_03779
Unannotated protein.
       0.773
GCA_000381925_04153
Unannotated protein.
  
  
  0.736
GCA_000381925_02239
Unannotated protein.
  
  
  0.730
GCA_000381925_02648
Unannotated protein.
  
   
 0.684
GCA_000381925_00396
Unannotated protein.
  
   
 0.675
GCA_000381925_00879
Unannotated protein.
  
  
  0.668
GCA_000381925_04630
Unannotated protein.
  
     0.660
GCA_000381925_04047
Unannotated protein.
  
     0.621
GCA_000381925_03778
Unannotated protein.
       0.608
Your Current Organism:
Nocardia sp. BMG111209
NCBI taxonomy Id: 1160137
Other names: N. sp. BMG111209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.