STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1L9VG67H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (225 aa)    
Predicted Functional Partners:
A0A1L9W016
PUA domain-containing protein.
   
 0.999
A0A1L9VAE5
Ribosomal_L7Ae domain-containing protein.
   
 0.998
A0A1L9V6U6
Uncharacterized protein.
   
 0.987
A0A1L9VLF7
Uncharacterized protein.
   
 0.985
A0A1L9VBV8
Uncharacterized protein.
   
 0.979
A0A1L9VGH9
Metallophos domain-containing protein.
   
 0.979
A0A1L9VWK7
Uncharacterized protein.
    
 0.978
A0A1L9VUK0
Uncharacterized protein.
   
 
 0.977
A0A1L9VVX7
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.965
A0A1L9V3H7
Nop domain-containing protein.
  
 
 0.952
Your Current Organism:
Aspergillus glaucus
NCBI taxonomy Id: 1160497
Other names: A. glaucus CBS 516.65, Aspergillus glaucus CBS 516.65
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