STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SU9_10319COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs. (77 aa)    
Predicted Functional Partners:
SU9_15267
COG2188 Transcriptional regulators.
  
     0.627
SU9_31026
COG2188 Transcriptional regulators.
  
     0.593
SU9_00220
COG2188 Transcriptional regulators.
  
     0.591
SU9_11493
COG2188 Transcriptional regulators.
  
     0.590
SU9_19680
COG2188 Transcriptional regulators.
  
     0.584
SU9_08744
COG2188 Transcriptional regulators.
  
     0.575
SU9_03201
COG2188 Transcriptional regulators.
  
     0.567
SU9_17650
COG2188 Transcriptional regulators.
  
     0.546
SU9_08145
COG2188 Transcriptional regulators.
  
     0.531
SU9_32248
COG2188 Transcriptional regulators.
  
     0.504
Your Current Organism:
Streptomyces auratus
NCBI taxonomy Id: 1160718
Other names: S. auratus AGR0001, Streptomyces auratus AGR0001, Streptomyces auratus str. AGR0001, Streptomyces auratus strain AGR0001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.