STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000412185_00443Unannotated protein. (668 aa)    
Predicted Functional Partners:
GCA_000412185_00282
Unannotated protein.
    
 0.927
GCA_000412185_02734
Unannotated protein.
 
  
  0.923
GCA_000412185_02609
Unannotated protein.
  
 
 0.911
GCA_000412185_01793
Unannotated protein.
    
  0.905
GCA_000412185_00442
Unannotated protein.
 
     0.884
GCA_000412185_02007
Unannotated protein.
  
    0.854
GCA_000412185_02650
Unannotated protein.
 
  
0.823
GCA_000412185_01776
Unannotated protein.
  
  0.816
GCA_000412185_02644
Unannotated protein.
 
  
 
0.813
GCA_000412185_01265
Unannotated protein.
 
  
  0.796
Your Current Organism:
Euryhalocaulis caribicus
NCBI taxonomy Id: 1161401
Other names: CGMCC 1.12036, E. caribicus, JCM 18163, Maricaulis sp. JL2009, strain JL2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.