STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000412185_01339Unannotated protein. (234 aa)    
Predicted Functional Partners:
GCA_000412185_01338
Unannotated protein.
       0.833
GCA_000412185_01337
Unannotated protein.
       0.823
GCA_000412185_02131
Unannotated protein.
    
 0.813
GCA_000412185_01340
Unannotated protein.
       0.744
GCA_000412185_03018
Unannotated protein.
    
  0.742
GCA_000412185_03022
Unannotated protein.
    
 0.719
GCA_000412185_01336
Unannotated protein.
       0.715
GCA_000412185_01335
Unannotated protein.
  
    0.604
GCA_000412185_02609
Unannotated protein.
  
 
 0.566
GCA_000412185_02410
Unannotated protein.
  
     0.513
Your Current Organism:
Euryhalocaulis caribicus
NCBI taxonomy Id: 1161401
Other names: CGMCC 1.12036, E. caribicus, JCM 18163, Maricaulis sp. JL2009, strain JL2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.