STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000412185_02282Unannotated protein. (316 aa)    
Predicted Functional Partners:
GCA_000412185_02283
Unannotated protein.
 
  
 0.968
GCA_000412185_00820
Unannotated protein.
 
   
  0.906
GCA_000412185_00250
Unannotated protein.
 
    
0.886
GCA_000412185_01034
Unannotated protein.
 
   
  0.583
GCA_000412185_02281
Unannotated protein.
       0.546
GCA_000412185_03129
Unannotated protein.
  
     0.529
GCA_000412185_03227
Unannotated protein.
  
     0.476
GCA_000412185_00352
Unannotated protein.
  
     0.469
GCA_000412185_03140
Unannotated protein.
  
     0.468
GCA_000412185_03134
Unannotated protein.
  
     0.464
Your Current Organism:
Euryhalocaulis caribicus
NCBI taxonomy Id: 1161401
Other names: CGMCC 1.12036, E. caribicus, JCM 18163, Maricaulis sp. JL2009, strain JL2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.