STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000412185_02690Unannotated protein. (97 aa)    
Predicted Functional Partners:
GCA_000412185_02691
Unannotated protein.
  
  
 0.845
GCA_000412185_02692
Unannotated protein.
  
    0.832
GCA_000412185_00590
Unannotated protein.
 
  
 0.750
GCA_000412185_00188
Unannotated protein.
  
    0.664
GCA_000412185_02766
Unannotated protein.
   
    0.622
GCA_000412185_02693
Unannotated protein.
       0.504
GCA_000412185_02082
Unannotated protein.
  
     0.478
GCA_000412185_02764
Unannotated protein.
   
    0.426
GCA_000412185_00089
Unannotated protein.
  
     0.424
GCA_000412185_00186
Unannotated protein.
  
    0.423
Your Current Organism:
Euryhalocaulis caribicus
NCBI taxonomy Id: 1161401
Other names: CGMCC 1.12036, E. caribicus, JCM 18163, Maricaulis sp. JL2009, strain JL2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.