STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yfbTPhosphoglycolate phosphatase. (219 aa)    
Predicted Functional Partners:
yniC
2-deoxyglucose-6-phosphatase.
  
  
 0.976
mtlA
Mannitol-specific PTS family enzyme IICBA component.
  
 
  0.949
dalD
Putative mannitol dehydrogenase.
    
  0.948
mtlD
Mannitol-1-phosphate dehydrogenase.
    
  0.948
yfbV
UPF0208 membrane protein.
       0.751
adhE
Bifunctional acetaldehyde-CoA/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
 
 
  0.678
EPIR_3204
Phosphoglycolate phosphatase 1.
  
  
  0.653
malL
Oligo-1,6-glucosidase.
 
 0.585
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.567
mrsA
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
    
 0.530
Your Current Organism:
Erwinia piriflorinigrans
NCBI taxonomy Id: 1161919
Other names: E. piriflorinigrans CFBP 5888, Erwinia piriflorinigrans CECT 7348, Erwinia piriflorinigrans CFBP 5888, Erwinia piriflorinigrans str. CFBP 5888, Erwinia piriflorinigrans strain CFBP 5888, Erwinia sp. CECT 7348
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