STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
urtBmglC-like Galactoside transport system permease protein. (519 aa)    
Predicted Functional Partners:
livK
Aliphatic amidase expression-regulating protein.
 
 
 0.999
fmdF
Autoinducer 2 import system permease protein lsrC AI-2 import system permease protein lsrC; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
braF
Phosphate import ATP-binding protein pstB.
 
 
 0.999
livF
Phosphate import ATP-binding protein pstB.
 
 
 0.999
EPIR_1313
Putative ABC transport system, ATP-binding component.
  
  
  0.966
livG
Branched-chain amino acid ABC transport system,ATP-binding component.
 
 
 0.916
livM
Branched-chain amino acid ABC transport system,inner membrane component; Belongs to the binding-protein-dependent transport system permease family.
 
0.882
ntaR
Fatty acid metabolism regulator protein.
     0.877
livJ
Branched-chain amino acid ABC transport system,periplasmic component.
  
 
 0.842
EPIR_3002
UreA carboxylase; Contig EPIR_CONTIG_20.
 
  
 0.740
Your Current Organism:
Erwinia piriflorinigrans
NCBI taxonomy Id: 1161919
Other names: E. piriflorinigrans CFBP 5888, Erwinia piriflorinigrans CECT 7348, Erwinia piriflorinigrans CFBP 5888, Erwinia piriflorinigrans str. CFBP 5888, Erwinia piriflorinigrans strain CFBP 5888, Erwinia sp. CECT 7348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.