STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPIR_3319Hypothetical protein. (368 aa)    
Predicted Functional Partners:
EPIR_3320
Hypothetical protein.
       0.704
EPIR_3321
Hypothetical protein.
       0.704
EPIR_3322
Hypothetical protein.
       0.699
rhs
Rhs-family protein.
       0.617
Your Current Organism:
Erwinia piriflorinigrans
NCBI taxonomy Id: 1161919
Other names: E. piriflorinigrans CFBP 5888, Erwinia piriflorinigrans CECT 7348, Erwinia piriflorinigrans CFBP 5888, Erwinia piriflorinigrans str. CFBP 5888, Erwinia piriflorinigrans strain CFBP 5888, Erwinia sp. CECT 7348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.