STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LFE_0087Putative periplasmic sensor signal transduction. (474 aa)    
Predicted Functional Partners:
LFE_0086
Putative two component transcriptional regulator.
 
 
 0.959
LFE_2309
Putative multisensor hybrid histidine kinase.
 
 
 0.930
LFE_1734
Putative two component transcriptional regulator, winged helix family.
 
 
 0.833
LFE_2056
Putative two component transcriptional regulator.
 
 
 0.831
LFE_0333
Putative two component transcriptional regulator.
 
 
 0.828
LFE_1733
Putative multi-sensor signal transduction histidine kinase.
 
 
 
 0.782
LFE_1173
Putative periplasmic sensor signal transduction histidine kinase.
  
 
 0.773
LFE_0389
Putative periplasmic sensor signal transduction histidine kinase.
  
 
 0.762
LFE_1368
Putative response regulator receiver protein.
  
 
 
 0.757
LFE_0388
Putative response regulator receiver protein.
  
 
   0.750
Your Current Organism:
Leptospirillum ferrooxidans
NCBI taxonomy Id: 1162668
Other names: L. ferrooxidans C2-3, Leptospirillum ferrooxidans C2-3, Leptospirillum ferrooxidans str. C2-3, Leptospirillum ferrooxidans strain C2-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.