STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbiCPutative precorrin-8X methylmutase. (327 aa)    
Predicted Functional Partners:
cbiA
Putative cobyrinic acid a, c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
 0.998
cbiE
Putative precorrin-6Y C5,15-methyltransferase.
 
 
 0.998
LFE_2448
precorrin-3B methylase.
  
 0.993
LFE_0984
Precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.
 
  
 0.989
LFE_2445
Putative precorrin-6B methyltransferase.
 
  
 0.988
cbiD
Putative cobalamin biosynthesis protein; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
  
 0.985
cobQ
Putative cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
  
 0.974
LFE_0982
Putative precorrin-2/cobalt-factor-2 C20-methyltransferase.
 
  
 0.967
cbiG
Putative cobalamin biosynthesis protein.
  
 0.943
cbiX
Putative cobalamin (vitamin B12) biosynthesis.
   
 0.917
Your Current Organism:
Leptospirillum ferrooxidans
NCBI taxonomy Id: 1162668
Other names: L. ferrooxidans C2-3, Leptospirillum ferrooxidans C2-3, Leptospirillum ferrooxidans str. C2-3, Leptospirillum ferrooxidans strain C2-3
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