STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LFE_2145Hypothetical protein. (518 aa)    
Predicted Functional Partners:
LFE_2147
Integral membrane protein; Belongs to the MlaE permease family.
 
 0.996
LFE_2146
Putative ABC transporter, ATP-binding protein.
 
 0.995
LFE_1730
Putative ABC transporter, permease.
 
 0.991
LFE_1213
Putative ABC transporter, permease protein.
 
 0.989
LFE_1729
ABC transporter, ATP-binding protein.
 
 0.988
LFE_1215
Putative ABC transporter.
  
  
  0.957
LFE_1728
Hypothetical protein.
  
  
 
0.927
LFE_1214
Putative ABC transporter.
  
  
  0.827
ompA/motB
Putative flagellar motor protein.
   
   0.620
LFE_2148
Putative alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.570
Your Current Organism:
Leptospirillum ferrooxidans
NCBI taxonomy Id: 1162668
Other names: L. ferrooxidans C2-3, Leptospirillum ferrooxidans C2-3, Leptospirillum ferrooxidans str. C2-3, Leptospirillum ferrooxidans strain C2-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.