STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LFE_2273Hypothetical protein. (166 aa)    
Predicted Functional Partners:
LFE_2274
Hypothetical protein.
 
 
 0.998
LFE_2275
Hypothetical protein.
 
 
 0.985
LFE_2280
Putative Rhs element Vgr protein.
 
  
 0.971
LFE_2287
Hypothetical protein.
 
  
 0.965
LFE_2277
Hypothetical protein.
 
  
 0.955
LFE_2278
Hypothetical protein.
 
  
 0.955
LFE_2288
Hypothetical protein.
 
  
 0.947
LFE_2290
Putative ImpA domain protein.
 
  
 0.922
LFE_2289
Hypothetical protein.
 
  
 0.885
LFE_2282
Putative pentapeptide repeat protein.
 
  
 0.875
Your Current Organism:
Leptospirillum ferrooxidans
NCBI taxonomy Id: 1162668
Other names: L. ferrooxidans C2-3, Leptospirillum ferrooxidans C2-3, Leptospirillum ferrooxidans str. C2-3, Leptospirillum ferrooxidans strain C2-3
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.