STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hypDPutative hydrogenase expression/formation protein. (380 aa)    
Predicted Functional Partners:
hypE
Putative hydrogenase expression/formation protein.
 
 0.999
hypC/hupF
Putative hydrogenase assembly chaperone.
 
 
 0.995
hypF
Putative (NiFe) hydrogenase maturation protein; Belongs to the SUA5 family.
 
  
 0.972
hypB
Putative hydrogenase accessory protein.
 
  
 0.948
LFE_2431
Hypothetical protein.
  
 
 0.946
hypA
Putative hydrogenase nickel incorporation protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
  
 0.793
LFE_2441
Putative high-affinity nickeltransporter; Belongs to the NiCoT transporter (TC 2.A.52) family.
       0.771
LFE_2428
Ferredoxin hydrogenase, large chain; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 
 0.591
LFE_2436
Hypothetical protein.
       0.572
LFE_2442
Hypothetical protein.
       0.543
Your Current Organism:
Leptospirillum ferrooxidans
NCBI taxonomy Id: 1162668
Other names: L. ferrooxidans C2-3, Leptospirillum ferrooxidans C2-3, Leptospirillum ferrooxidans str. C2-3, Leptospirillum ferrooxidans strain C2-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.