Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TOPH_00414 | TOPH_03143 | A0A0L0NLR5 | A0A0L0NE74 | Diphthine--ammonia ligase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.659 |
TOPH_00414 | TOPH_07331 | A0A0L0NLR5 | A0A0L0N2L7 | Diphthine--ammonia ligase. | Adenine phosphoribosyltransferase. | 0.877 |
TOPH_00414 | TOPH_08531 | A0A0L0NLR5 | A0A0L0MYJ3 | Diphthine--ammonia ligase. | GMP synthase [glutamine-hydrolyzing]. | 0.941 |
TOPH_00470 | TOPH_04012 | A0A0L0NKW9 | A0A0L0NB30 | Adenosine kinase. | Inosine-5'-monophosphate dehydrogenase; Belongs to the IMPDH/GMPR family. | 0.699 |
TOPH_00470 | TOPH_04768 | A0A0L0NKW9 | A0A0L0N9W8 | Adenosine kinase. | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | 0.786 |
TOPH_00470 | TOPH_04968 | A0A0L0NKW9 | A0A0L0N9E5 | Adenosine kinase. | AMP deaminase. | 0.902 |
TOPH_00470 | TOPH_05919 | A0A0L0NKW9 | A0A0L0N629 | Adenosine kinase. | Bifunctional purine biosynthesis protein ADE17. | 0.699 |
TOPH_00470 | TOPH_07331 | A0A0L0NKW9 | A0A0L0N2L7 | Adenosine kinase. | Adenine phosphoribosyltransferase. | 0.881 |
TOPH_00470 | TOPH_08531 | A0A0L0NKW9 | A0A0L0MYJ3 | Adenosine kinase. | GMP synthase [glutamine-hydrolyzing]. | 0.656 |
TOPH_00565 | TOPH_03143 | A0A0L0NM96 | A0A0L0NE74 | Bifunctional epoxide hydrolase 2. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.820 |
TOPH_00565 | TOPH_04012 | A0A0L0NM96 | A0A0L0NB30 | Bifunctional epoxide hydrolase 2. | Inosine-5'-monophosphate dehydrogenase; Belongs to the IMPDH/GMPR family. | 0.916 |
TOPH_00565 | TOPH_04768 | A0A0L0NM96 | A0A0L0N9W8 | Bifunctional epoxide hydrolase 2. | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | 0.873 |
TOPH_00565 | TOPH_04968 | A0A0L0NM96 | A0A0L0N9E5 | Bifunctional epoxide hydrolase 2. | AMP deaminase. | 0.759 |
TOPH_00565 | TOPH_05919 | A0A0L0NM96 | A0A0L0N629 | Bifunctional epoxide hydrolase 2. | Bifunctional purine biosynthesis protein ADE17. | 0.798 |
TOPH_00565 | TOPH_06434 | A0A0L0NM96 | A0A0L0N4L9 | Bifunctional epoxide hydrolase 2. | Acyl-CoA dehydrogenase family member 10. | 0.828 |
TOPH_00565 | TOPH_07331 | A0A0L0NM96 | A0A0L0N2L7 | Bifunctional epoxide hydrolase 2. | Adenine phosphoribosyltransferase. | 0.817 |
TOPH_00565 | TOPH_08531 | A0A0L0NM96 | A0A0L0MYJ3 | Bifunctional epoxide hydrolase 2. | GMP synthase [glutamine-hydrolyzing]. | 0.851 |
TOPH_03143 | TOPH_00414 | A0A0L0NE74 | A0A0L0NLR5 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Diphthine--ammonia ligase. | 0.659 |
TOPH_03143 | TOPH_00565 | A0A0L0NE74 | A0A0L0NM96 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Bifunctional epoxide hydrolase 2. | 0.820 |
TOPH_03143 | TOPH_04012 | A0A0L0NE74 | A0A0L0NB30 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Inosine-5'-monophosphate dehydrogenase; Belongs to the IMPDH/GMPR family. | 0.905 |
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