STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOPH_03163Sphingosine N-acyltransferase lac1. (508 aa)    
Predicted Functional Partners:
TOPH_04974
Alkaline ceramidase 3.
    
 0.930
TOPH_01212
Dihydrosphingosine 1-phosphate phosphatase.
    
 0.923
TOPH_03764
Sphingolipid C4-hydroxylase SUR2; Belongs to the sterol desaturase family.
   
 0.918
TOPH_07007
Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.
    
 0.912
TOPH_07847
Sphingoid long chain base kinase 5.
     
 0.903
TOPH_00720
3-ketodihydrosphingosine reductase gsl-3.
     
 0.902
TOPH_05764
Neutral ceramidase.
     
 0.891
TOPH_04806
Neutral ceramidase.
     
 0.891
TOPH_05240
Inositol phosphosphingolipids phospholipase C.
     
 0.571
TOPH_01433
Ceramide glucosyltransferase.
     
 0.561
Your Current Organism:
Tolypocladium ophioglossoides
NCBI taxonomy Id: 1163406
Other names: Elaphocordyceps ophioglossoides CBS 100239, Elaphocordyceps ophioglossoides CBS100239, T. ophioglossoides CBS 100239, Tolypocladium ophioglossoides CBS 100239
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.