STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UU7_06043Hypothetical protein; COG2363 Uncharacterized small membrane protein. (115 aa)    
Predicted Functional Partners:
UU7_06038
Hypothetical protein; COG0120 Ribose 5-phosphate isomerase.
       0.621
UU7_06053
COG2847 Uncharacterized protein conserved in bacteria.
       0.565
UU7_06048
COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.
  
    0.557
Your Current Organism:
Rhodanobacter spathiphylli
NCBI taxonomy Id: 1163407
Other names: R. spathiphylli B39, Rhodanobacter spathiphylli B39, Rhodanobacter spathiphylli str. B39, Rhodanobacter spathiphylli strain B39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.