STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384335_03870Unannotated protein. (423 aa)    
Predicted Functional Partners:
GCA_000384335_00297
Unannotated protein.
 
 0.974
GCA_000384335_02964
Unannotated protein.
  
 0.908
GCA_000384335_03742
Unannotated protein.
     
 0.905
GCA_000384335_02051
Unannotated protein.
  
 
 0.904
GCA_000384335_03872
Unannotated protein.
 
 
 0.876
GCA_000384335_00016
Unannotated protein.
  
 0.869
GCA_000384335_00285
Unannotated protein.
 
 
 0.861
GCA_000384335_00863
Unannotated protein.
    
 0.764
GCA_000384335_01307
Unannotated protein.
    
  0.759
GCA_000384335_00291
Unannotated protein.
 
 
 0.739
Your Current Organism:
Hyphomicrobium sp. 99
NCBI taxonomy Id: 1163419
Other names: H. sp. 99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.