STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN35168.1Putative lipopolysaccharide biosinthesis-related acetyltransferase. (180 aa)    
Predicted Functional Partners:
BAN35169.1
Methyltransferase type 11.
 
     0.716
BAN35167.1
Putative flippase.
 
  
 0.714
BAN35171.1
Glycosyl transferase group 1.
 
  
 0.665
BAN35180.1
Mannose-1-phosphate guanylyltransferase (GDP); K00971; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.594
BAN36795.1
Glycan acetyltransferase.
  
     0.569
BAN35170.1
Hypothetical protein.
     
 0.558
BAN35164.1
Group 1 glycosyl transferase.
 
  
 0.476
BAN35174.1
Glycosyl transferase group 1; K03208.
 
  
 0.461
BAN36790.1
Undecaprenyl-phosphate galactosephosphotransferase.
  
  
 0.457
BAN35476.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
    0.424
Your Current Organism:
Sulfuricella denitrificans
NCBI taxonomy Id: 1163617
Other names: S. denitrificans skB26, Sulfuricella denitrificans DSM 22764, Sulfuricella denitrificans NBRC 105220, Sulfuricella denitrificans skB26, Sulfuricella denitrificans str. skB26, Sulfuricella denitrificans strain skB26, sulfur-oxidizing bacterium NBRC 105220
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