STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbbSRibulose-bisphosphate carboxylase, small subunit; K01602. (118 aa)    
Predicted Functional Partners:
cbbL
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
 
 0.998
cbbM
Ribulose bisphosphate carboxylase, large subunit; Belongs to the RuBisCO large chain family.
 
 0.991
BAN36336.1
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
    
 0.922
BAN35367.1
HAD-superfamily hydrolase; K01091.
    
 0.910
cbbP
Phosphoribulokinase; K00855.
 
 
 0.888
cbbO
Von Willebrand factor type A.
 
   
 0.848
BAN35839.1
Hypothetical protein.
   
 
 0.800
BAN34054.1
Transferase.
    
 
 0.795
BAN35846.1
Hypothetical protein.
 
     0.790
BAN35854.1
Carbonate dehydratase; K01673.
    
 
 0.760
Your Current Organism:
Sulfuricella denitrificans
NCBI taxonomy Id: 1163617
Other names: S. denitrificans skB26, Sulfuricella denitrificans DSM 22764, Sulfuricella denitrificans NBRC 105220, Sulfuricella denitrificans skB26, Sulfuricella denitrificans str. skB26, Sulfuricella denitrificans strain skB26, sulfur-oxidizing bacterium NBRC 105220
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.