STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFH42058.1Hypothetical protein. (110 aa)    
Predicted Functional Partners:
AFH42057.1
CRISPR-associated autoregulator, DevR family.
   
   0.926
AFH42056.1
Hypothetical protein.
   
   0.874
AFH42053.1
Hypothetical protein.
   
   0.853
AFH42054.1
ATP-dependent RNA helicase related protein.
   
   0.853
AFH42055.1
Hypothetical protein.
       0.610
AFH42051.1
Hypothetical protein.
       0.572
AFH42052.1
HTH_ARSR domain containing protein.
       0.571
AFH42059.1
Hypothetical protein.
       0.486
Your Current Organism:
Fervidicoccus fontis
NCBI taxonomy Id: 1163730
Other names: Desulfurococcales archaeon Kam940, F. fontis Kam940, Fervidicoccus fontis DSM 19380, Fervidicoccus fontis Kam940, Fervidicoccus fontis str. Kam940, Fervidicoccus fontis strain Kam940
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.