STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFH42181.1DEAD/DEAH box helicase domain protein. (1055 aa)    
Predicted Functional Partners:
AFH42566.1
Na_H_Exchanger domain containing protein.
 
    0.803
AFH42179.1
hydroxymethylglutaryl-CoA reductase, degradative; Belongs to the HMG-CoA reductase family.
       0.538
AFH42180.1
Gamma-glutamyltransferase.
       0.538
AFH42716.1
Cytochrome c biogenesis protein, transmembrane region.
 
    0.458
AFH42182.1
Molybdenum cofactor synthesis domain protein.
       0.439
AFH42178.1
Alcohol dehydrogenase.
   
    0.431
AFH42218.1
Alcohol dehydrogenase, iron-containing.
   
    0.431
AFH42969.1
Iron-containing alcohol dehydrogenase.
   
    0.431
hel308
DEAD/DEAH box helicase domain protein; DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks.
 
     0.426
AFH42603.1
Phosphoenolpyruvate carboxykinase-like protein.
  
     0.411
Your Current Organism:
Fervidicoccus fontis
NCBI taxonomy Id: 1163730
Other names: Desulfurococcales archaeon Kam940, F. fontis Kam940, Fervidicoccus fontis DSM 19380, Fervidicoccus fontis Kam940, Fervidicoccus fontis str. Kam940, Fervidicoccus fontis strain Kam940
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