STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFH42525.1Methanol dehydrogenase regulatory - like protein. (317 aa)    
Predicted Functional Partners:
AFH42527.1
Hypothetical protein.
       0.883
AFH42526.1
Hypothetical protein.
       0.815
AFH42528.1
Hypothetical protein.
       0.788
AFH42524.1
Hypothetical protein.
  
  
 0.746
htpX
Endopeptidase, family M48B; Belongs to the peptidase M48B family.
  
  
 0.613
AFH42534.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
  
  
 0.611
AFH42829.1
GHMP kinase.
   
    0.606
AFH42522.1
Hypothetical protein.
       0.605
AFH42521.1
Hypothetical protein.
       0.561
AFH42529.1
Hypothetical protein.
       0.556
Your Current Organism:
Fervidicoccus fontis
NCBI taxonomy Id: 1163730
Other names: Desulfurococcales archaeon Kam940, F. fontis Kam940, Fervidicoccus fontis DSM 19380, Fervidicoccus fontis Kam940, Fervidicoccus fontis str. Kam940, Fervidicoccus fontis strain Kam940
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.