STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFH42628.1Glycosyltransferase, family 4; Contains GT4 and GT1 domains. (381 aa)    
Predicted Functional Partners:
AFH42626.1
Glycosyltransferase, family 2; Two GT2 domains.
 
  
 0.742
AFH42627.1
Hypothetical protein.
       0.636
AFH42625.1
Glycosyltransferase, family 4; Contains GT4 and GT1 domains.
       0.608
AFH42624.1
Glycosyltransferase, family 4; Contains GT4 and GT1 domains.
 
     0.586
AFH42620.1
Glycosyltransferase, family 4; Contains GT4 and GT1 domains.
 
     0.583
AFH42298.1
Glycosyltransferase, family 2.
 
  
 0.510
AFH42621.1
Glycosyltransferase; GT1-domain containing protein.
 
     0.506
AFH42632.1
Glycosyltransferase, family 4; Contains GT4 and GT1 domains.
  
     0.492
AFH42618.1
NAD-dependent epimerase/dehydratase.
 
  
 0.474
AFH43047.1
ERCC4-type nuclease.
   
 0.464
Your Current Organism:
Fervidicoccus fontis
NCBI taxonomy Id: 1163730
Other names: Desulfurococcales archaeon Kam940, F. fontis Kam940, Fervidicoccus fontis DSM 19380, Fervidicoccus fontis Kam940, Fervidicoccus fontis str. Kam940, Fervidicoccus fontis strain Kam940
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.