STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFH42871.1Putative flavoredoxin. (65 aa)    
Predicted Functional Partners:
AFH42869.1
YjgH/F family protein - putative translation initiation inhibitor.
  
  
 0.494
AFH42557.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
 0.472
AFH42870.1
Major facilitator superfamily MFS_1.
       0.471
AFH42873.1
Pyruvate dehydrogenase, beta subunit (lipoamide), (pdhB-2).
  
    0.455
AFH42872.1
Pyruvate dehydrogenase (acetyl-transferring).
       0.437
AFH42776.1
Pyridoxal-5'-phosphate-dependent protein beta subunit.
  
    0.431
AFH43309.1
acyl-CoA dehydrogenase family protein.
  
  
 0.415
AFH42831.1
Rubrerythrin.
     
 0.404
Your Current Organism:
Fervidicoccus fontis
NCBI taxonomy Id: 1163730
Other names: Desulfurococcales archaeon Kam940, F. fontis Kam940, Fervidicoccus fontis DSM 19380, Fervidicoccus fontis Kam940, Fervidicoccus fontis str. Kam940, Fervidicoccus fontis strain Kam940
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