STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFH43226.1FAD dependent oxidoreductase. (387 aa)    
Predicted Functional Partners:
AFH43225.1
Hypothetical protein.
 
 0.998
AFH43129.1
Serine hydroxymethyltransferase.
  
 
 0.945
AFH43180.1
Pyridoxal phosphate-dependent acyltransferase, putative.
  
 
 0.932
AFH42373.1
Glycine dehydrogenase subunit 2.
  
 
 0.923
AFH42371.1
Glycine dehydrogenase subunit 1.
  
 
 0.918
AFH42381.1
Glycine cleavage system aminomethyltransferase T.
 
 
 0.881
AFH42600.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.780
fni
Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
 
 
 0.740
AFH42702.1
NUDIX hydrolase.
  
 
 0.635
AFH42251.1
Phosphomethylpyrimidine kinase.
  
  
 0.572
Your Current Organism:
Fervidicoccus fontis
NCBI taxonomy Id: 1163730
Other names: Desulfurococcales archaeon Kam940, F. fontis Kam940, Fervidicoccus fontis DSM 19380, Fervidicoccus fontis Kam940, Fervidicoccus fontis str. Kam940, Fervidicoccus fontis strain Kam940
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