STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDA40829.1Uncharacterized conserved protein YndB, AHSA1/START domain. (160 aa)    
Predicted Functional Partners:
SDA40818.1
Transcriptional regulator, ArsR family.
 
    0.852
clpP
ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
       0.731
SDA44454.1
DNA-binding transcriptional regulator, ArsR family.
 
    0.696
SDA78934.1
Transcriptional regulator, ArsR family.
 
    0.652
SDA44477.1
Hypothetical protein.
  
     0.582
SDA52080.1
Transcriptional regulator, ArsR family.
 
    0.570
SDA97448.1
Glutathione S-transferase.
  
  
  0.570
SDA40808.1
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
       0.491
SDA40846.1
Hypothetical protein.
       0.483
SDA52260.1
DoxX-like family protein.
 
     0.470
Your Current Organism:
Mesorhizobium qingshengii
NCBI taxonomy Id: 1165689
Other names: CCBAU 33460, CGMCC 1.12097, HAMBI 3277, LMG 26793, LMG:26793, M. qingshengii, Mesorhizobium qingshengii Zheng et al. 2013, Mesorhizobium sp. CCBAU 33430, Mesorhizobium sp. CCBAU 33431, Mesorhizobium sp. CCBAU 33446, Mesorhizobium sp. CCBAU 33455, Mesorhizobium sp. CCBAU 33460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.