STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDA43694.1Putative hemin transport protein. (353 aa)    
Predicted Functional Partners:
SDA43680.1
Iron complex transport system substrate-binding protein.
 
 
 0.998
hmuV
Iron complex transport system ATP-binding protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
  
 0.995
SDA43669.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.982
SDA43719.1
Hemoglobin/transferrin/lactoferrin receptor protein.
 
  
 0.835
SDA43704.1
Hemin uptake protein HemP.
  
  
 0.799
SDA43736.1
Hypothetical protein.
 
     0.797
SDA43751.1
Protein TonB.
 
   
 0.730
SDA43763.1
Heme-degrading monooxygenase HmoA.
 
     0.475
SDA40731.1
Sulfate permease, MFS superfamily.
   
    0.412
Your Current Organism:
Mesorhizobium qingshengii
NCBI taxonomy Id: 1165689
Other names: CCBAU 33460, CGMCC 1.12097, HAMBI 3277, LMG 26793, LMG:26793, M. qingshengii, Mesorhizobium qingshengii Zheng et al. 2013, Mesorhizobium sp. CCBAU 33430, Mesorhizobium sp. CCBAU 33431, Mesorhizobium sp. CCBAU 33446, Mesorhizobium sp. CCBAU 33455, Mesorhizobium sp. CCBAU 33460
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