STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSTG_12563Uncharacterized protein. (243 aa)    
Predicted Functional Partners:
PSTG_16710
Uncharacterized protein; Belongs to the peptidase M24B family.
    
 0.733
PSTG_03994
AMP_N domain-containing protein.
    
 0.733
PSTG_04038
AMP_N domain-containing protein.
    
 0.733
PSTG_15493
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.544
PSTG_14870
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.544
PSTG_08710
Glutathione synthetase.
   
 
  0.501
PSTG_03700
Uncharacterized protein.
    
 0.475
PSTG_06824
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
    
  0.439
PSTG_04963
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
    
  0.439
PSTG_04959
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
    
  0.439
Your Current Organism:
Puccinia striiformis
NCBI taxonomy Id: 1165861
Other names: P. striiformis f. sp. tritici PST-78, Puccinia striiformis 2K041-Yr9, Puccinia striiformis f. sp. tritici 2K41-Yr9, race PST-78, Puccinia striiformis f. sp. tritici PST-78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.