STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAES_0003Hypothetical protein. (264 aa)    
Predicted Functional Partners:
FAES_0004
Aminopeptidase.
       0.783
FAES_2764
UPF0679 protein.
  
     0.729
lpxC
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
 
   
 0.639
FAES_0469
Hypothetical protein.
 
    0.638
FAES_3542
Hypothetical protein.
 
  
 0.572
ybjG
Phosphoesterase, PA-phosphatase related.
 
     0.571
FAES_4597
Outer membrane protein assembly complex, YaeT protein.
  
     0.566
FAES_1293
PpiC-type peptidyl-prolyl cis-trans isomerase.
 
    0.563
FAES_3736
PpiC-type peptidyl-prolyl cis-trans isomerase.
  
    0.559
FAES_4503
Metallophosphoesterase.
  
   
 0.540
Your Current Organism:
Fibrella aestuarina
NCBI taxonomy Id: 1166018
Other names: F. aestuarina BUZ 2, Fibrella aestuarina BUZ 2, Fibrella aestuarina str. BUZ 2, Fibrella aestuarina strain BUZ 2, Flexibacteraceae bacterium BUZ 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.