STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAES_0813Putative UDP-glucose epimerase ytcB. (316 aa)    
Predicted Functional Partners:
FAES_1782
Nucleotide sugar dehydrogenase.
 0.981
FAES_0814
Glycosyl transferase family 2.
 
    0.885
rfbF
Glucose-1-phosphate cytidylyltransferase.
  
 0.874
FAES_1443
UTP-glucose-1-phosphate uridylyltransferase.
 
 0.869
FAES_4698
Nucleotidyl transferase.
 
 
 0.847
FAES_1227
Glycogen(starch) synthase.
   
 
  0.818
FAES_2259
Cellulose synthase (UDP-forming); Belongs to the glycosyl hydrolase 26 family.
  
 0.807
FAES_2788
Trehalose-phosphatase.
     
 0.800
FAES_0812
Protein-tyrosine phosphatase.
  
  
 0.711
rpsN
Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
   
  0.705
Your Current Organism:
Fibrella aestuarina
NCBI taxonomy Id: 1166018
Other names: F. aestuarina BUZ 2, Fibrella aestuarina BUZ 2, Fibrella aestuarina str. BUZ 2, Fibrella aestuarina strain BUZ 2, Flexibacteraceae bacterium BUZ 2
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