STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAES_1403TPR repeat-containing protein. (941 aa)    
Predicted Functional Partners:
FAES_1402
Hypothetical protein.
       0.773
hisS
histidyl-tRNA synthetase.
  
    0.729
FAES_1404
Hypothetical protein.
 
    0.662
FAES_2788
Trehalose-phosphatase.
   
    0.607
FAES_1401
Hypothetical protein.
       0.570
FAES_0293
Cell surface receptor IPT/TIG domain protein.
  
    0.528
pknD
Serine/threonine-protein kinase afsK.
  
    0.528
FAES_1976
Hypothetical protein.
  
    0.528
FAES_4186
Hypothetical protein.
 
   
 0.495
FAES_4185
RNA polymerase, sigma-24 subunit, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily.
 
    0.446
Your Current Organism:
Fibrella aestuarina
NCBI taxonomy Id: 1166018
Other names: F. aestuarina BUZ 2, Fibrella aestuarina BUZ 2, Fibrella aestuarina str. BUZ 2, Fibrella aestuarina strain BUZ 2, Flexibacteraceae bacterium BUZ 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.