STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAES_1433Coagulation factor 5/8 type domain protein. (603 aa)    
Predicted Functional Partners:
FAES_2335
Glycoside hydrolase family 39.
    
 0.903
FAES_2338
Glycoside hydrolase family 43.
     
  0.900
FAES_2344
Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
     
  0.900
xylB
Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
     
  0.900
uxaC
Glucuronate isomerase.
 
  
 0.838
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
  
 
 0.818
FAES_1442
GHMP kinase.
     
  0.800
FAES_1434
Hypothetical protein.
       0.572
FAES_1435
Hypothetical protein.
       0.480
FAES_1436
Putative DsrE/DsrF-like family protein.
       0.480
Your Current Organism:
Fibrella aestuarina
NCBI taxonomy Id: 1166018
Other names: F. aestuarina BUZ 2, Fibrella aestuarina BUZ 2, Fibrella aestuarina str. BUZ 2, Fibrella aestuarina strain BUZ 2, Flexibacteraceae bacterium BUZ 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.