STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAES_1762Oxidoreductase domain protein. (371 aa)    
Predicted Functional Partners:
FAES_1761
Xylose isomerase domain protein TIM barrel.
 
    0.926
FAES_1763
Membrane-bound dehydrogenase domain protein.
 
     0.898
FAES_2549
Membrane-bound dehydrogenase domain protein.
 
     0.703
FAES_0337
Membrane-bound dehydrogenase domain protein.
  
     0.628
lolI
4-hydroxyphenylpyruvate dioxygenase.
  
    0.622
FAES_3143
Xylose isomerase domain protein TIM barrel.
  
    0.614
FAES_0508
Oxidoreductase domain protein.
  
     0.548
FAES_3336
Oxidoreductase domain protein.
  
     0.544
FAES_1160
Blue (type 1) copper domain protein.
  
     0.543
FAES_1760
Transcriptional regulator, AraC family.
 
    0.540
Your Current Organism:
Fibrella aestuarina
NCBI taxonomy Id: 1166018
Other names: F. aestuarina BUZ 2, Fibrella aestuarina BUZ 2, Fibrella aestuarina str. BUZ 2, Fibrella aestuarina strain BUZ 2, Flexibacteraceae bacterium BUZ 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.